Extension of SpatialExperiment with sf
active 2025-01-02 → 2026-05-06 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 490 days from 2025-01-02 to 2026-05-06. Pushes: 32 total, peak 3 in a day. Pull requests: 3 total, peak 3 in a day. Issues: 16 total, peak 3 in a day. Comments: 13 total, peak 2 in a day. Stars: 7 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| lambdamoses | 46 | 31 | 0 | 4 |
| heziqing | 3 | 0 | 0 | 2 |
| estellad | 2 | 0 | 1 | 1 |
| LTLA | 2 | 0 | 0 | 1 |
| swbioinf | 2 | 0 | 0 | 1 |
| alikhuseynov | 2 | 0 | 0 | 2 |
| hou | 1 | 0 | 1 | 0 |
| PietroD | 1 | 0 | 0 | 1 |
| dpcook | 1 | 0 | 0 | 0 |
| hpages | 1 | 0 | 0 | 0 |
| savarycl | 1 | 0 | 0 | 0 |
| cathalgking | 1 | 0 | 0 | 0 |
| mariiabilous | 1 | 0 | 1 | 0 |
| NJNataren | 1 | 0 | 0 | 1 |
| github-actions[bot] | 1 | 1 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue#86lambdamoses2026-04-10 03:32'R CMD check' ERROR on Mac Silicon
- Issue#86hpages2026-04-08 22:54'R CMD check' ERROR on Mac Silicon
- Issue#85savarycl2026-03-02 01:29readXenium function from SpatialFeatureExperiment R library requires an update for Xenium Output files version 4
- Issue comment#83PietroD2026-01-15 14:39Load output from other segmentation tools
- Pull request#79hou2026-01-11 02:57
- Pull request#80estellad2026-01-11 02:53
- Pull request#71mariiabilous2026-01-11 02:52
- Issue comment#84NJNataren2025-12-11 07:10Issue with image path using readXenium()
- Issue comment#77estellad2025-09-17 22:18Read in VisiumHD cell segmentations from SpaceRanger 4.0+
- Issue#78dpcook2025-07-30 22:04Workflow to incorporate H&E image info SFE?
- Issue#72lambdamoses2025-06-28 15:22More informative error message when a method called by `findSpatialNeighbors` throws an error
- Issue#76lambdamoses2025-06-28 14:48Hack engineering CRS in WKT to use PROJ for affine transformations
- Issue#73lambdamoses2025-06-28 14:46Split by graph components
- Issue#75lambdamoses2025-06-27 18:37Find spatial neighborhood graph based on any geometric predicate
- Issue#74lambdamoses2025-06-27 18:33Deprecate the `samples` argument in `read10xVisiumSFE`
- Issue comment#69lambdamoses2025-06-27 15:15merge SFE objects
- Issue#69cathalgking2025-06-02 06:27merge SFE objects
- Issue#65lambdamoses2025-02-11 04:25Cropping MERFISH image is slow when subsetting
- Issue comment#64LTLA2025-02-04 07:55SFE's `imgRaster` method doesn't follow the generic's contract
- Issue comment#64lambdamoses2025-02-04 07:19SFE's `imgRaster` method doesn't follow the generic's contract
- Issue#64lambdamoses2025-02-04 07:19SFE's `imgRaster` method doesn't follow the generic's contract
- Issue comment#64lambdamoses2025-01-31 06:11SFE's `imgRaster` method doesn't follow the generic's contract
- Issue#64LTLA2025-01-31 00:54SFE's `imgRaster` method doesn't follow the generic's contract
- Issue#60lambdamoses2025-01-26 00:07readVizgen, multiple z-planes
- Issue comment#60lambdamoses2025-01-25 05:29readVizgen, multiple z-planes
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 7 stars here means stars gained during the window, not the repo's star count.