Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
active 2023-08-24 → 2025-07-06 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 683 days from 2023-08-24 to 2025-07-06. Pushes: 6 total, peak 3 in a day. Pull requests: 1 total, peak 1 in a day. Issues: 39 total, peak 3 in a day. Comments: 59 total, peak 6 in a day. Stars: 51 total, peak 2 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| patrickbryant1 | 35 | 6 | 0 | 25 |
| Rohit-Satyam | 19 | 0 | 0 | 13 |
| theammn | 8 | 0 | 0 | 1 |
| jowodo | 7 | 0 | 0 | 4 |
| ChristopherBottomsOMRF | 6 | 0 | 1 | 1 |
| KoussaiB | 5 | 0 | 0 | 1 |
| KunFang93 | 5 | 0 | 0 | 3 |
| shoebridges | 4 | 0 | 0 | 4 |
| mcatto | 3 | 0 | 0 | 1 |
| rubenalv | 2 | 0 | 0 | 0 |
| mglgc | 2 | 0 | 0 | 1 |
| MinjieHu | 1 | 0 | 0 | 0 |
| Renske27 | 1 | 0 | 0 | 1 |
| akdess | 1 | 0 | 0 | 0 |
| li210 | 1 | 0 | 0 | 1 |
| molecules | 1 | 0 | 0 | 1 |
| LucasJang7 | 1 | 0 | 0 | 0 |
| soundharramsay | 1 | 0 | 0 | 0 |
| luxiangze | 1 | 0 | 0 | 1 |
| tsanders00 | 1 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#33patrickbryant12025-07-04 10:57Multiple environment conflicts in speed_ppi.yml
- Issue comment#33mglgc2025-06-24 12:43Multiple environment conflicts in speed_ppi.yml
- Issue comment#33patrickbryant12025-06-24 11:24Multiple environment conflicts in speed_ppi.yml
- Issue#33mglgc2025-06-19 09:04Multiple environment conflicts in speed_ppi.yml
- Issue comment#32patrickbryant12025-05-19 20:14Cannot create a tensor proto whose content is larger than 2GB
- Issue#32Rohit-Satyam2024-12-25 13:54Cannot create a tensor proto whose content is larger than 2GB
- Issue comment#31Rohit-Satyam2024-12-12 12:56How to determine the memory requirement?
- Issue comment#31Rohit-Satyam2024-12-06 11:29How to determine the memory requirement?
- Issue comment#25tsanders002024-11-27 10:49error when creating the environment
- Issue#30Rohit-Satyam2024-11-23 18:30SpeedPPI terminates with error: Cannot reshape a tensor with 2024432 elements to shape [4363,471,1] (2054973 elements)
- Issue comment#31Rohit-Satyam2024-11-02 19:28How to determine the memory requirement?
- Issue comment#31Rohit-Satyam2024-10-07 14:17How to determine the memory requirement?
- Issue comment#31Rohit-Satyam2024-10-05 14:38How to determine the memory requirement?
- Issue comment#31patrickbryant12024-10-03 16:42How to determine the memory requirement?
- Issue#31Rohit-Satyam2024-10-03 16:27How to determine the memory requirement?
- Issue comment#30Rohit-Satyam2024-09-21 13:52SpeedPPI terminates with error: Cannot reshape a tensor with 2024432 elements to shape [4363,471,1] (2054973 elements)
- Issue#30Rohit-Satyam2024-09-21 09:38SpeedPPI terminates with error: Cannot reshape a tensor with 2024432 elements to shape [4363,471,1] (2054973 elements)
- Issue comment#29Rohit-Satyam2024-09-19 08:04When runnin the test example, I get the following warning
- Issue#29Rohit-Satyam2024-09-19 08:04When runnin the test example, I get the following warning
- Issue comment#29Rohit-Satyam2024-09-17 20:22When runnin the test example, I get the following warning
- Issue#29Rohit-Satyam2024-09-17 20:17When runnin the test example, I get the following warning
- Issue comment#22Rohit-Satyam2024-09-17 07:37pip can't find "tf-nightly==2.16.0.dev20231211"
- Issue#28rubenalv2024-09-16 13:55uniclus30 (2018) vs uniref30 (2023)
- Issue comment#28patrickbryant12024-09-16 13:30uniclus30 (2018) vs uniref30 (2023)
- Issue comment#28Rohit-Satyam2024-09-16 13:25uniclus30 (2018) vs uniref30 (2023)
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 51 stars here means stars gained during the window, not the repo's star count.