Builds a PEP from SRA or GEO accessions
active 2023-11-22 → 2026-03-25 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 855 days from 2023-11-22 to 2026-03-25. Pushes: 24 total, peak 5 in a day. Pull requests: 6 total, peak 1 in a day. Issues: 14 total, peak 3 in a day. Comments: 17 total, peak 10 in a day. Stars: 12 total, peak 2 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| khoroshevskyi | 36 | 16 | 4 | 7 |
| nsheff | 9 | 7 | 0 | 0 |
| nleroy917 | 9 | 0 | 0 | 5 |
| donaldcampbelljr | 6 | 1 | 1 | 1 |
| pedro-w | 5 | 0 | 0 | 3 |
| Copilot | 4 | 0 | 0 | 0 |
| lizhebio | 1 | 0 | 0 | 0 |
| Dkaaaaa | 1 | 0 | 0 | 0 |
| meesgenomebc | 1 | 0 | 1 | 0 |
| codecov[bot] | 1 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Pull request#149khoroshevskyi2026-01-22 21:42
- Releasekhoroshevskyi2025-12-01 23:51v0.12.9
- Pull request#148khoroshevskyi2025-11-06 01:41
- Pull request#146meesgenomebc2025-08-08 21:32
- Issue#145nsheff2025-07-17 16:37configuring fasterq-dump
- Issue comment#142donaldcampbelljr2025-07-11 17:26sraconvert can't be run because pypiper is not listed in requirements
- Issue#142donaldcampbelljr2025-07-11 17:26sraconvert can't be run because pypiper is not listed in requirements
- Issue#141donaldcampbelljr2025-07-11 17:23ref_genome contains white spaces
- Issue#135donaldcampbelljr2025-07-11 17:23use VersionInHelp parser
- Pull request#144donaldcampbelljr2025-07-11 17:23
- Issue#131khoroshevskyi2025-07-10 06:08Update installation of prefetch in docs
- Issue comment#134khoroshevskyi2025-07-10 06:07Update docs
- Issue#134khoroshevskyi2025-07-10 06:07Update docs
- Pull request#144khoroshevskyi2025-07-10 05:34
- Issue comment#140khoroshevskyi2025-07-10 05:08download speed is too slow
- Issue#140khoroshevskyi2025-07-10 05:08download speed is too slow
- Issue#143khoroshevskyi2025-07-02 19:04Geofetch is not always parsing nested items
- Issue#140Dkaaaaa2024-11-18 02:04download speed is too slow
- Issue#136lizhebio2024-03-01 02:42how to get GSE information for a SRR run id?
- Issue#135nsheff2024-02-07 22:05use VersionInHelp parser
- Issue#134khoroshevskyi2024-02-04 19:31Update docs
- Pull request#133khoroshevskyi2024-02-04 19:30
- Issue comment#132codecov[bot]2024-01-18 21:36Release 0.12.6
- Issue comment#130khoroshevskyi2024-01-13 00:31fetch_all does not work
- Issue comment#130pedro-w2024-01-12 08:58fetch_all does not work
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 12 stars here means stars gained during the window, not the repo's star count.