Parse multiple Antimicrobial Resistance Analysis Reports into a common data structure
active 2023-09-08 → 2026-08-10 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 1068 days from 2023-09-08 to 2026-08-10. Pushes: 18 total, peak 6 in a day. Pull requests: 18 total, peak 3 in a day. Issues: 21 total, peak 4 in a day. Comments: 26 total, peak 12 in a day. Stars: 52 total, peak 3 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| fmaguire | 52 | 17 | 8 | 16 |
| zwets | 15 | 0 | 9 | 6 |
| iframst | 3 | 0 | 0 | 1 |
| cimendes | 2 | 1 | 0 | 0 |
| ursamiklavcic | 2 | 0 | 0 | 2 |
| marchoeppner | 2 | 0 | 0 | 1 |
| rl-13 | 1 | 0 | 0 | 0 |
| tseemann | 1 | 0 | 0 | 0 |
| leosanbu | 1 | 0 | 0 | 0 |
| MPC21 | 1 | 0 | 0 | 0 |
| guillechuma | 1 | 0 | 0 | 0 |
| incoherentian | 1 | 0 | 0 | 0 |
| DanyMatute | 1 | 0 | 1 | 0 |
Recent activity
Latest issues, pull requests and releases
- Pull request#109zwets2026-02-28 01:44
- Issue comment#107fmaguire2025-11-27 14:03Cannot run hamronize
- Issue#107iframst2025-11-24 23:37Cannot run hamronize
- Issue comment#107iframst2025-11-24 23:37Cannot run hamronize
- Issue#107iframst2025-11-24 22:46Cannot run hamronize
- Issue#85fmaguire2025-05-29 14:02Updating version support for starmar, amrfinderplus, kmerresistance - summarize output breaks
- Issue#91fmaguire2025-05-29 14:02Nucleotide variant mutations not reported by hAMRonize from AMRfinderplus
- Issue comment#103fmaguire2025-05-29 14:02[BUG] Docker container uses outdated ResFinderIO.py causing NoneType Error
- Issue#103fmaguire2025-05-29 14:02[BUG] Docker container uses outdated ResFinderIO.py causing NoneType Error
- Issue comment#104fmaguire2025-05-29 14:02hamronize amrfinderplus "ValueError: 'Protein identifier' is not in list"
- Releasefmaguire2025-05-29 13:03v1.1.9
- Issue#105incoherentian2025-05-29 12:42Please bump the Bioconda package to v1.1.9
- Issue#103guillechuma2025-04-24 11:31[BUG] Docker container uses outdated ResFinderIO.py causing NoneType Error
- Issue comment#85ursamiklavcic2025-04-14 08:32Updating version support for starmar, amrfinderplus, kmerresistance - summarize output breaks
- Issue comment#85zwets2025-04-12 13:29Updating version support for starmar, amrfinderplus, kmerresistance - summarize output breaks
- Issue comment#85ursamiklavcic2025-04-10 06:52Updating version support for starmar, amrfinderplus, kmerresistance - summarize output breaks
- Issue comment#102marchoeppner2025-01-21 05:43[BUG] Redundant results not merging
- Issue comment#102fmaguire2025-01-17 14:13[BUG] Redundant results not merging
- Issue#102fmaguire2025-01-17 14:13[BUG] Redundant results not merging
- Issue comment#100fmaguire2025-01-17 14:01[BUG] Antibiotic column from RGI output not being pulled into "antimicrobial agent" column
- Issue#100fmaguire2025-01-17 14:01[BUG] Antibiotic column from RGI output not being pulled into "antimicrobial agent" column
- Pull request#101fmaguire2025-01-17 14:01
- Issue#102marchoeppner2025-01-15 06:03[BUG] Redundant results not merging
- Pull request#101zwets2025-01-15 00:19
- Issue comment#100zwets2025-01-14 20:52[BUG] Antibiotic column from RGI output not being pulled into "antimicrobial agent" column
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 52 stars here means stars gained during the window, not the repo's star count.