Skip to content

My copy of picrust2

active 2023-09-242026-04-09 (UTC)

Partial coverage19,720 / 25,383 hourly files (78%) · 2 absent upstream · 5,660 failed, retryable2023-09-202026-08-12 (UTC)— sampled evenly across the window, so rankings and trends hold; absolute counts scale up.
Events
293
Pushes
13
Pull requests
0
Issues
61
Stars
59
Forks
7

Activity over time

Daily event counts in the loaded window

Line chart, 929 days from 2023-09-24 to 2026-04-09. Pushes: 13 total, peak 4 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 61 total, peak 4 in a day. Comments: 88 total, peak 17 in a day. Stars: 59 total, peak 2 in a day.

  • Pushes
  • Pull requests
  • Issues
  • Comments
  • Stars

Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.

Top contributors

Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity

Recent activity

Latest issues, pull requests and releases

  • Issue comment#414R-Wright-12026-04-09 13:27
    The abundance of poorly aligned input sequences is too high.
  • Issue comment#408github-actions[bot]2026-04-04 03:59
    Can there be an update on the Galaxy Australia, please?
  • Issue comment#413gbonthond2026-04-03 18:15
    Predictions returning older EC labels, but pathways expecting the new labels?
  • Issue#408github-actions[bot]2026-03-21 03:38
    Can there be an update on the Galaxy Australia, please?
  • Issue#404github-actions[bot]2026-03-14 03:53
    Question about KO hierarchy output in PICRUSt2 pipeline
  • Issue comment#404github-actions[bot]2026-03-14 03:53
    Question about KO hierarchy output in PICRUSt2 pipeline
  • Issue#404github-actions[bot]2026-02-27 03:55
    Question about KO hierarchy output in PICRUSt2 pipeline
  • Issue#402github-actions[bot]2026-02-17 04:01
    No default files Conda Install 2.6.3 to custom path
  • Issue comment#402DininduSenanayake2026-02-16 16:37
    No default files Conda Install 2.6.3 to custom path
  • Issue comment#408bernt-matthias2026-02-15 10:45
    Can there be an update on the Galaxy Australia, please?
  • Issue#402github-actions[bot]2026-02-15 04:05
    No default files Conda Install 2.6.3 to custom path
  • Issue#407Bihapove2026-02-07 08:50
    pathway_pipeline.py KeyError when used for KEGG pathway
  • Issue#407Bihapove2026-02-07 08:45
    pathway_pipeline.py KeyError when used for KEGG pathway
  • Issue#407Bihapove2026-02-05 07:55
    pathway_pipeline.py KeyError when used for KEGG pathway
  • Issue comment#405DanCake30002026-02-03 14:21
    picrust2 with ITS data (KeyError: '16S_rRNA_Count')
  • Issue#405DanCake30002026-02-02 11:49
    picrust2 with ITS data (KeyError: '16S_rRNA_Count')
  • Issue#403zhaoy20202026-01-18 03:06
    PICRUSt2 issued a warning and then stopped automatically
  • Issue#401R-Wright-12025-12-23 14:03
    AttributeError: 'DataFrame' object has no attribute 'append'
  • Issue#400R-Wright-12025-12-23 14:03
    ASV table - from DADA2
  • Issue comment#400ewrubin2025-12-22 02:28
    ASV table - from DADA2
  • Issue comment#400R-Wright-12025-12-19 12:59
    ASV table - from DADA2
  • Issue comment#398ScipioGermanicus2025-11-26 13:41
    Discussion: Acceptable NSTI values in PICRUSt2
  • Issue comment#398R-Wright-12025-11-26 13:16
    Discussion: Acceptable NSTI values in PICRUSt2
  • Issue#398ScipioGermanicus2025-11-26 07:42
    Discussion: Acceptable NSTI values in PICRUSt2
  • Issue comment#396github-actions[bot]2025-11-23 03:15
    Update workflow for ITS

Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 59 stars here means stars gained during the window, not the repo's star count.