🧬 Understanding the code of life: Generative modeling of regulatory DNA sequences with diffusion probabilistic models 💨
active 2023-08-15 → 2026-08-12 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 1094 days from 2023-08-15 to 2026-08-12. Pushes: 306 total, peak 17 in a day. Pull requests: 224 total, peak 20 in a day. Issues: 107 total, peak 13 in a day. Comments: 157 total, peak 13 in a day. Stars: 138 total, peak 4 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| renovate[bot] | 236 | 130 | 81 | 25 |
| ssenan | 175 | 31 | 57 | 8 |
| cameronraysmith | 163 | 86 | 21 | 8 |
| mergify[bot] | 101 | 50 | 40 | 5 |
| github-actions[bot] | 84 | 0 | 21 | 40 |
| codecov[bot] | 60 | 0 | 0 | 60 |
| allcontributors[bot] | 16 | 8 | 3 | 5 |
| review-notebook-app[bot] | 4 | 0 | 0 | 4 |
| pingsutw | 1 | 0 | 0 | 1 |
| XuanrZhang | 1 | 0 | 0 | 0 |
| DeevanshuGoyal | 1 | 0 | 0 | 1 |
| lucapinello | 1 | 0 | 1 | 0 |
| GitHUB-ZYD | 1 | 0 | 0 | 0 |
| Mao-young | 1 | 0 | 0 | 0 |
| HelloWorldLTY | 1 | 0 | 0 | 0 |
| LucasSilvaFerreira | 1 | 1 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Pull request#378renovate[bot]2026-03-25 21:26
- Pull request#377renovate[bot]2026-03-13 20:06
- Issue#375github-actions[bot]2026-03-05 02:14Question: design choice of not using PyTorch Lightning
- Issue#171github-actions[bot]2026-03-01 02:15Dependency Dashboard
- Issue#375github-actions[bot]2026-02-26 02:14Question: design choice of not using PyTorch Lightning
- Issue#375Mao-young2025-12-27 14:08Question: design choice of not using PyTorch Lightning
- Issue comment#369renovate[bot]2025-12-22 02:14chore(deps): update actions/stale action to v10
- Pull request#374renovate[bot]2025-11-20 16:53
- Issue#370github-actions[bot]2025-11-15 02:07Request for Model Evaluation Code Release
- Issue#370github-actions[bot]2025-11-08 02:04Request for Model Evaluation Code Release
- Issue comment#370github-actions[bot]2025-11-08 02:04Request for Model Evaluation Code Release
- Pull request#372renovate[bot]2025-10-08 06:31
- Pull request#371renovate[bot]2025-10-07 20:26
- Pull request#369renovate[bot]2025-09-04 05:11
- Issue comment#319renovate[bot]2025-07-18 02:14chore(deps): update python docker tag to v3.13
- Pull request#319github-actions[bot]2025-07-18 02:13
- Pull request#308github-actions[bot]2025-07-08 02:13
- Issue comment#324renovate[bot]2025-07-02 02:13chore(deps): update actions/stale action to v9
- Pull request#324github-actions[bot]2025-07-02 02:12
- Pull request#366ssenan2025-07-01 15:09
- Issue#363ssenan2025-07-01 13:24Using load_saved_data=False doesn't overwrite the original pickle file
- Issue#364ssenan2025-06-30 22:50Provide notebook example of training on new dataset
- Pull request#365ssenan2025-06-30 22:50
- Issue comment#365review-notebook-app[bot]2025-06-30 22:49docs(new_data): provide example notebook of using new dataset to train
- Issue#364ssenan2025-06-30 20:11Provide notebook example of training on new dataset
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 138 stars here means stars gained during the window, not the repo's star count.