Metagenomic Intra-Species Diversity Analysis (MIDAS)
active 2025-03-11 → 2026-02-12 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 339 days from 2025-03-11 to 2026-02-12. Pushes: 0 total, peak 0 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 11 total, peak 3 in a day. Comments: 38 total, peak 5 in a day. Stars: 1 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| zhaoc1 | 24 | 0 | 0 | 18 |
| wrshoemaker | 10 | 0 | 0 | 6 |
| ursamiklavcic | 3 | 0 | 0 | 3 |
| gamalielcabria | 3 | 0 | 0 | 3 |
| pbradz | 2 | 0 | 0 | 1 |
| run3-cdc | 1 | 0 | 0 | 1 |
| michaelwasney | 1 | 0 | 0 | 1 |
| qiaojunys | 1 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#156zhaoc12025-08-14 15:43Constructing my own MIDASDB
- Issue comment#156michaelwasney2025-08-08 23:15Constructing my own MIDASDB
- Issue comment#156zhaoc12025-07-20 18:39Constructing my own MIDASDB
- Issue comment#156michaelwasney2025-07-20 16:05Constructing my own MIDASDB
- Issue comment#156zhaoc12025-07-19 17:42Constructing my own MIDASDB
- Issue comment#156michaelwasney2025-07-18 20:28Constructing my own MIDASDB
- Issue#17zhaoc12025-06-23 21:47support AWS instance types other than r5.12xlarge
- Issue#150zhaoc12025-06-20 17:10Issues with conda install on OS X
- Issue#151zhaoc12025-06-20 17:10DB download issue
- Issue comment#155zhaoc12025-06-20 17:05Missing genes_info.tsv in MIDAS2 database build using midas2 build_bowtie2db
- Issue#155zhaoc12025-06-20 17:05Missing genes_info.tsv in MIDAS2 database build using midas2 build_bowtie2db
- Issue comment#155qiaojunys2025-06-20 07:26Missing genes_info.tsv in MIDAS2 database build using midas2 build_bowtie2db
- Issue#153zhaoc12025-06-19 18:53Mapping gene names in merge_genes output to gene names in merge_snps output
- Issue#154zhaoc12025-06-19 18:53MIDAS v3 documentation
- Issue comment#155zhaoc12025-06-19 18:51Missing genes_info.tsv in MIDAS2 database build using midas2 build_bowtie2db
- Issue comment#154zhaoc12025-06-05 15:38MIDAS v3 documentation
- Issue comment#153zhaoc12025-05-19 15:45Mapping gene names in merge_genes output to gene names in merge_snps output
- Issue comment#153ursamiklavcic2025-05-19 13:07Mapping gene names in merge_genes output to gene names in merge_snps output
- Issue comment#153ursamiklavcic2025-05-16 08:17Mapping gene names in merge_genes output to gene names in merge_snps output
- Issue comment#153zhaoc12025-05-15 22:36Mapping gene names in merge_genes output to gene names in merge_snps output
- Issue comment#153zhaoc12025-05-15 15:40Mapping gene names in merge_genes output to gene names in merge_snps output
- Issue comment#153ursamiklavcic2025-05-15 15:26Mapping gene names in merge_genes output to gene names in merge_snps output
- Issue comment#153zhaoc12025-05-15 15:19Mapping gene names in merge_genes output to gene names in merge_snps output
- Issue comment#153zhaoc12025-05-15 15:01Mapping gene names in merge_genes output to gene names in merge_snps output
- Issue comment#153zhaoc12025-05-14 21:59Mapping gene names in merge_genes output to gene names in merge_snps output
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 1 stars here means stars gained during the window, not the repo's star count.