scPred package for cell type prediction from scRNA-seq data
active 2023-08-16 → 2026-05-16 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 1005 days from 2023-08-16 to 2026-05-16. Pushes: 0 total, peak 0 in a day. Pull requests: 1 total, peak 1 in a day. Issues: 4 total, peak 2 in a day. Comments: 16 total, peak 2 in a day. Stars: 43 total, peak 2 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| zhaokunkun1 | 3 | 0 | 0 | 2 |
| royfrancis | 3 | 0 | 0 | 1 |
| rreggiar | 1 | 0 | 0 | 1 |
| tfguinan | 1 | 0 | 1 | 0 |
| HaReL1 | 1 | 0 | 0 | 1 |
| reesyxan | 1 | 0 | 0 | 0 |
| rikfor | 1 | 0 | 0 | 1 |
| seekning | 1 | 0 | 0 | 1 |
| rustlab1 | 1 | 0 | 0 | 1 |
| anglixue | 1 | 0 | 0 | 1 |
| iichelhadi | 1 | 0 | 0 | 1 |
| yossawat-suw | 1 | 0 | 0 | 1 |
| bontix-77 | 1 | 0 | 0 | 1 |
| chisquare09 | 1 | 0 | 0 | 1 |
| hk20013106 | 1 | 0 | 0 | 1 |
| Icedoesnotburn | 1 | 0 | 0 | 1 |
| bioinformaticsperl | 1 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#24bontix-772025-12-10 09:39Warning message for Quick-TRANSfer
- Issue comment#26hk200131062025-09-20 09:04scPredict error
- Issue comment#26chisquare092025-02-19 10:30scPredict error
- Issue comment#26iichelhadi2024-11-01 01:07scPredict error
- Issue#29royfrancis2024-08-13 12:38Error in if (nrow(spmodel@features[[positiveClass]]) == 0) {: argument is of length zero
- Issue comment#29royfrancis2024-08-13 12:38Error in if (nrow(spmodel@features[[positiveClass]]) == 0) {: argument is of length zero
- Issue#29royfrancis2024-08-13 11:26Error in if (nrow(spmodel@features[[positiveClass]]) == 0) {: argument is of length zero
- Issue comment#28seekning2024-07-23 18:02query <- scPredict(query, reference) ● Matching reference with new dataset... ─ 2000 features present in reference loadings ─ 6 features shared between reference and new dataset ─ 0.3% of features in the reference are present in new dataset Error in `GetAssayData()`: ! `assay` must be one of "RNA" or "integrated", not "data".
- Issue comment#28rreggiar2024-05-27 19:57query <- scPredict(query, reference) ● Matching reference with new dataset... ─ 2000 features present in reference loadings ─ 6 features shared between reference and new dataset ─ 0.3% of features in the reference are present in new dataset Error in `GetAssayData()`: ! `assay` must be one of "RNA" or "integrated", not "data".
- Issue comment#26HaReL12024-05-19 19:29scPredict error
- Issue comment#28anglixue2024-04-09 05:43query <- scPredict(query, reference) ● Matching reference with new dataset... ─ 2000 features present in reference loadings ─ 6 features shared between reference and new dataset ─ 0.3% of features in the reference are present in new dataset Error in `GetAssayData()`: ! `assay` must be one of "RNA" or "integrated", not "data".
- Issue comment#26zhaokunkun12024-03-15 11:33scPredict error
- Issue comment#26zhaokunkun12024-03-15 11:33scPredict error
- Issue#28zhaokunkun12024-03-15 11:08query <- scPredict(query, reference) ● Matching reference with new dataset... ─ 2000 features present in reference loadings ─ 6 features shared between reference and new dataset ─ 0.3% of features in the reference are present in new dataset Error in `GetAssayData()`: ! `assay` must be one of "RNA" or "integrated", not "data".
- Pull request#27tfguinan2024-01-18 05:32
- Issue comment#26yossawat-suw2024-01-11 19:04scPredict error
- Issue comment#26rikfor2023-11-23 09:06scPredict error
- Issue comment#26rustlab12023-11-21 01:39scPredict error
- Issue comment#20Icedoesnotburn2023-11-17 18:46errors during cell classification
- Issue comment#26bioinformaticsperl2023-11-03 08:22scPredict error
- Issue#26reesyxan2023-10-19 18:41scPredict error
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 43 stars here means stars gained during the window, not the repo's star count.