Reproducible workflow for Amplicon sequencing analysis. Heavily using DADA2 and implemented in snakemake
active 2024-01-24 → 2025-04-23 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 456 days from 2024-01-24 to 2025-04-23. Pushes: 11 total, peak 1 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 7 total, peak 3 in a day. Comments: 5 total, peak 2 in a day. Stars: 1 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| ppreshant | 23 | 11 | 0 | 5 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#4ppreshant2024-04-06 06:13snakemake v6.9.1 causing `AttributeError: 'str' object has no attribute 'name'`
- Issue#4ppreshant2024-04-06 06:13snakemake v6.9.1 causing `AttributeError: 'str' object has no attribute 'name'`
- Issue#4ppreshant2024-04-06 06:10snakemake v6.9.1 causing `AttributeError: 'str' object has no attribute 'name'`
- Issue comment#3ppreshant2024-04-06 05:50Error during test run : reporting doesn't seem to work
- Issue#3ppreshant2024-03-30 06:19Error during test run : reporting doesn't seem to work
- Issue comment#2ppreshant2024-03-30 05:46Unable to initialize conda environments
- Issue#2ppreshant2024-03-30 05:46Unable to initialize conda environments
- Issue comment#2ppreshant2024-03-30 05:15Unable to initialize conda environments
- Issue#2ppreshant2024-03-29 17:21Unable to initialize conda environments
- Issue comment#1ppreshant2024-03-29 17:09Not able to initialize dadasnake in snakemake -v 8.10 (Error: name `srcdir` is not defined)
- Issue#1ppreshant2024-03-29 17:09Not able to initialize dadasnake in snakemake -v 8.10 (Error: name `srcdir` is not defined)
- Issue#1ppreshant2024-03-29 16:54Not able to initialize dadasnake in snakemake -v 8.10
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 1 stars here means stars gained during the window, not the repo's star count.