Probabilistic Alignment of Spatial Transcriptomics Experiments
active 2023-12-04 → 2026-03-06 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 824 days from 2023-12-04 to 2026-03-06. Pushes: 0 total, peak 0 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 12 total, peak 2 in a day. Comments: 11 total, peak 3 in a day. Stars: 19 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| Yin-XN | 4 | 0 | 0 | 2 |
| RonZeira | 4 | 0 | 0 | 3 |
| mrland99 | 3 | 0 | 0 | 2 |
| CAUiKUN | 2 | 0 | 0 | 1 |
| lvmt | 2 | 0 | 0 | 2 |
| DruncBread | 2 | 0 | 0 | 0 |
| zhoumeng123456 | 1 | 0 | 0 | 0 |
| quiquevb23 | 1 | 0 | 0 | 0 |
| zhangms1709 | 1 | 0 | 0 | 1 |
| liuchunlei0430 | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue#46ondina-draia2025-07-22 15:31GlmpcaError: for count data, the minimum value must be >=0
- Issue#46ondina-draia2025-07-22 15:28GlmpcaError: for count data, the minimum value must be >=0
- Issue comment#45CAUiKUN2025-06-03 14:02Result of pairwise slice alignment
- Issue comment#42RonZeira2025-06-03 13:36Alignment Order
- Issue comment#45RonZeira2025-06-03 13:29Result of pairwise slice alignment
- Issue#45CAUiKUN2025-06-01 12:36Result of pairwise slice alignment
- Issue#41Yin-XN2025-02-11 02:01Issue with pairwise_align: numItermax Warning and Suboptimal Alignment
- Issue comment#41lvmt2025-02-05 05:25Issue with pairwise_align: numItermax Warning and Suboptimal Alignment
- Issue#43DruncBread2025-01-24 06:10All the element in OT matrix are the same
- Issue#42DruncBread2025-01-24 04:46Alignment Order
- Issue comment#41Yin-XN2025-01-07 04:30Issue with pairwise_align: numItermax Warning and Suboptimal Alignment
- Issue comment#41Yin-XN2024-12-26 12:24Issue with pairwise_align: numItermax Warning and Suboptimal Alignment
- Issue comment#41lvmt2024-12-25 02:27Issue with pairwise_align: numItermax Warning and Suboptimal Alignment
- Issue#41Yin-XN2024-12-18 02:34Issue with pairwise_align: numItermax Warning and Suboptimal Alignment
- Issue comment#40mrland992024-10-25 00:12How to plot the aligned image on top of the tissue image?
- Issue#40quiquevb232024-09-24 10:40How to plot the aligned image on top of the tissue image?
- Issue#38zhoumeng1234562024-06-02 16:23the rank of the aligned matrix
- Issue#35mrland992024-03-14 04:10Inconsistent gene expression positions before and after integration
- Issue comment#33mrland992024-03-14 04:08TypeError: cg() got multiple values for argument 'numItermax'
- Issue comment#33zhangms17092024-03-13 03:01TypeError: cg() got multiple values for argument 'numItermax'
- Issue comment#37RonZeira2024-01-28 08:54Some questions about PAA metric
- Issue#37RonZeira2024-01-28 08:54Some questions about PAA metric
- Issue#37liuchunlei04302024-01-24 23:08Some questions about PAA metric
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 19 stars here means stars gained during the window, not the repo's star count.