Benchmark empirical datasets for phylogenetic method development
active 2023-08-18 → 2025-08-21 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 735 days from 2023-08-18 to 2025-08-21. Pushes: 53 total, peak 8 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 25 total, peak 13 in a day. Comments: 26 total, peak 9 in a day. Stars: 5 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| HuaiyanRen | 53 | 48 | 0 | 5 |
| roblanf | 47 | 5 | 0 | 17 |
| DS4B-ANU | 3 | 0 | 0 | 3 |
| ZMHyx321 | 1 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Issue#60roblanf2023-11-21 01:11add concat and loci folders
- Issue comment#42roblanf2023-11-21 00:53figure out a programmatic way to get the timetree dates
- Issue#42roblanf2023-11-21 00:53figure out a programmatic way to get the timetree dates
- Issue comment#41roblanf2023-11-21 00:46run tests with nextflow
- Issue#41roblanf2023-11-21 00:46run tests with nextflow
- Issue#59roblanf2023-11-21 00:44update yaml tests
- Issue comment#34roblanf2023-11-21 00:44change dx.doi.org to doi.org
- Issue#34roblanf2023-11-21 00:44change dx.doi.org to doi.org
- Issue comment#33roblanf2023-11-21 00:43add link to figshare dataset in yaml file
- Issue#33roblanf2023-11-21 00:43add link to figshare dataset in yaml file
- Issue comment#23roblanf2023-11-21 00:42run all alignments through geneious
- Issue#23roblanf2023-11-21 00:42run all alignments through geneious
- Issue#58roblanf2023-11-21 00:41remove all datasets from new_2023 branch
- Issue#56roblanf2023-11-21 00:41add dataset_curation section to yaml file
- Issue comment#50roblanf2023-11-21 00:40update yaml file
- Issue#50roblanf2023-11-21 00:40update yaml file
- Issue#57roblanf2023-11-21 00:39name edits script and csv file
- Issue comment#56roblanf2023-11-21 00:36add dataset_curation section to yaml file
- Issue#56roblanf2023-11-21 00:29add dataset_curation section to yaml file
- Issue#46roblanf2023-11-21 00:20add locus charpartitions
- Issue comment#46DS4B-ANU2023-11-21 00:18add locus charpartitions
- Issue comment#47DS4B-ANU2023-11-21 00:11add a csv file with alignment information
- Issue comment#55ZMHyx3212023-10-30 04:56include gene family datasets
- Issue#55roblanf2023-10-16 21:41include gene family datasets
- Issue#54roblanf2023-10-16 21:40add some transposon datasets
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 5 stars here means stars gained during the window, not the repo's star count.