a tool to filter sites in a FASTA-format whole-genome pseudo-alignment
active 2023-08-15 → 2026-02-03 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 904 days from 2023-08-15 to 2026-02-03. Pushes: 26 total, peak 8 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 13 total, peak 6 in a day. Comments: 8 total, peak 3 in a day. Stars: 46 total, peak 6 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
Recent activity
Latest issues, pull requests and releases
- Issue comment#7rrwick2024-12-04 04:26awk one-liner alternative
- Issue#7rrwick2024-12-04 04:26awk one-liner alternative
- Issue#7tseemann2024-12-04 03:55awk one-liner alternative
- Issue comment#6rrwick2024-12-03 04:34Automatic selection of core theshold
- Issue#6tseemann2024-12-03 02:01Automatic selection of core theshold
- Issue comment#1rrwick2024-11-22 03:14Is this in conda?
- Issue#1rrwick2024-11-22 03:14Is this in conda?
- Releaserrwick2024-11-20 05:32Core-SNP-filter v0.2.0
- Issue#2rrwick2024-11-20 02:51Does this have a CI test suite?
- Issue comment#2rrwick2024-11-20 02:50Does this have a CI test suite?
- Issue comment#5rrwick2024-11-20 02:38Invariant site stats for IQTREE
- Issue#5rrwick2024-11-20 02:38Invariant site stats for IQTREE
- Issue comment#4rrwick2024-11-20 01:47Stats about how much was removed?
- Issue#4rrwick2024-11-20 01:47Stats about how much was removed?
- Issue comment#3rrwick2024-11-19 20:55Ungraceful error on /dev/null input
- Issue#3rrwick2024-11-19 20:55Ungraceful error on /dev/null input
- Issue comment#4tseemann2024-11-19 04:51Stats about how much was removed?
- Issue#5tseemann2024-11-19 04:48Invariant site stats for IQTREE
- Issue#4tseemann2024-11-19 04:46Stats about how much was removed?
- Issue#3tseemann2024-11-19 04:34Ungraceful error on /dev/null input
- Issue#2tseemann2024-11-19 04:33Does this have a CI test suite?
- Issue#1tseemann2024-11-19 04:30Is this in conda?
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 46 stars here means stars gained during the window, not the repo's star count.