A tool for generating consensus long-read assemblies for bacterial genomes
active 2023-08-17 → 2025-12-28 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 865 days from 2023-08-17 to 2025-12-28. Pushes: 6 total, peak 2 in a day. Pull requests: 1 total, peak 1 in a day. Issues: 37 total, peak 3 in a day. Comments: 52 total, peak 3 in a day. Stars: 78 total, peak 3 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| rrwick | 51 | 6 | 1 | 30 |
| TobyHelol | 5 | 0 | 0 | 3 |
| marade | 5 | 0 | 0 | 5 |
| DingJingZhi | 4 | 0 | 0 | 2 |
| georgiesamaha | 3 | 0 | 0 | 1 |
| qiangqianglab | 3 | 0 | 0 | 2 |
| noahmueller97 | 3 | 0 | 0 | 0 |
| osvatic | 3 | 0 | 0 | 1 |
| ASUQ | 3 | 0 | 0 | 2 |
| abcdot | 2 | 0 | 0 | 0 |
| ctberezin | 1 | 0 | 0 | 1 |
| JiayinBioGit | 1 | 0 | 0 | 1 |
| sasyed3 | 1 | 0 | 0 | 1 |
| alexweisberg | 1 | 0 | 0 | 1 |
| niederhuth | 1 | 0 | 0 | 0 |
| sghignone | 1 | 0 | 0 | 0 |
| muntean-alex | 1 | 0 | 0 | 0 |
| zmqstc | 1 | 0 | 0 | 0 |
| AwesomePz | 1 | 0 | 0 | 1 |
| erikwolfsohn | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#83rrwick2025-09-11 01:25CalledProcessError when generating a consensus
- Issue comment#88rrwick2025-08-25 04:46miniasm_and_minipolish.sh can not find
- Issue comment#88qiangqianglab2025-08-24 05:00miniasm_and_minipolish.sh can not find
- Issue#88qiangqianglab2025-08-24 04:10miniasm_and_minipolish.sh can not find
- Issue comment#60qiangqianglab2025-08-24 04:06miniasm_and_minipolish.sh
- Issue comment#83AwesomePz2025-08-13 01:37CalledProcessError when generating a consensus
- Issue comment#47rrwick2025-07-21 21:59trycycler reconsile could continue evaluating contigs after one fails
- Issue comment#86rrwick2025-07-07 02:40Update mash.py
- Issue comment#85rrwick2025-07-07 02:39Update cluster.py
- Pull request#85rrwick2025-07-07 02:39
- Issue comment#84rrwick2025-05-15 21:32seeded assemblies
- Issue#84sghignone2025-05-15 11:49seeded assemblies
- Issue#83TobyHelol2025-05-05 01:17CalledProcessError when generating a consensus
- Issue comment#83TobyHelol2025-05-05 01:17CalledProcessError when generating a consensus
- Issue comment#83rrwick2025-05-04 21:26CalledProcessError when generating a consensus
- Issue comment#83TobyHelol2025-05-03 14:24CalledProcessError when generating a consensus
- Issue comment#83JiayinBioGit2025-05-02 08:15CalledProcessError when generating a consensus
- Issue comment#83TobyHelol2025-05-02 07:16CalledProcessError when generating a consensus
- Issue comment#83rrwick2025-05-02 04:28CalledProcessError when generating a consensus
- Issue#83TobyHelol2025-05-01 16:54CalledProcessError when generating a consensus
- Issue comment#82rrwick2025-03-27 00:35Add argument to provide own starting sequences.
- Issue#82rrwick2025-03-27 00:35Add argument to provide own starting sequences.
- Issue#82niederhuth2025-03-20 17:23Add argument to provide own starting sequences.
- Issue comment#78rrwick2025-02-07 04:35dna_r10.4.1_e8.2_400bps_sup@v5.0.0 & Trycycler &Medaka
- Issue#78rrwick2025-02-07 04:35dna_r10.4.1_e8.2_400bps_sup@v5.0.0 & Trycycler &Medaka
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 78 stars here means stars gained during the window, not the repo's star count.