Python package to perform normalization and variance-stabilization of single-cell data
Jupyter Notebook · active 2023-09-10 → 2026-02-11 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 886 days from 2023-09-10 to 2026-02-11. Pushes: 2 total, peak 1 in a day. Pull requests: 4 total, peak 1 in a day. Issues: 4 total, peak 1 in a day. Comments: 12 total, peak 6 in a day. Stars: 9 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| saketkc | 8 | 2 | 2 | 4 |
| sourcery-ai[bot] | 7 | 0 | 0 | 6 |
| minigel | 2 | 0 | 0 | 0 |
| houlinyu | 2 | 0 | 0 | 1 |
| mikecuoco | 2 | 0 | 2 | 0 |
| Prunoideae | 1 | 0 | 0 | 1 |
| DestinyXuanQAQ | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue#17DestinyXuanQAQ2025-04-23 07:16There is an error in this code, when I run SCTransform()
- Pull request#16saketkc2025-04-15 01:56
- Issue comment#16saketkc2025-04-15 01:56Update README.rst with new conda installation instructions
- Pull request#16mikecuoco2025-04-14 22:26
- Issue comment#15saketkc2025-04-05 10:53Remove scanpy from requirements.txt
- Pull request#15saketkc2025-04-05 10:53
- Pull request#15mikecuoco2025-04-03 16:30
- Issue comment#7Prunoideae2024-03-20 05:04How to get corrected counts
- Issue#14minigel2023-12-11 20:01Feature request: return all genes
- Issue#14minigel2023-12-01 04:35Feature request: return all genes
- Issue comment#13saketkc2023-09-11 13:47Could not install pySCTransform
- Issue comment#13houlinyu2023-09-11 02:23Could not install pySCTransform
- Issue comment#13saketkc2023-09-11 00:51Could not install pySCTransform
- Issue#13houlinyu2023-09-10 23:09Could not install pySCTransform
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 9 stars here means stars gained during the window, not the repo's star count.