Paired REad TEXTure Mapper. Converts SAM formatted read pairs into genome contact maps.
active 2024-03-22 → 2026-07-15 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 846 days from 2024-03-22 to 2026-07-15. Pushes: 12 total, peak 4 in a day. Pull requests: 1 total, peak 1 in a day. Issues: 12 total, peak 2 in a day. Comments: 15 total, peak 2 in a day. Stars: 7 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| yumisims | 19 | 9 | 1 | 5 |
| additive3 | 7 | 0 | 0 | 5 |
| Rhia15 | 5 | 0 | 0 | 2 |
| jgrg | 3 | 3 | 0 | 0 |
| ksc289 | 2 | 0 | 0 | 1 |
| SamCT | 2 | 0 | 0 | 1 |
| YingChen94 | 1 | 0 | 0 | 0 |
| jacquelinemattos | 1 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Issue#22yumisims2026-03-03 20:10Add additional resolution support 2^17 texel (if desktop resources allow).
- Issue#23yumisims2026-03-03 20:10Increase stream buffer size to support long reads.
- Issue comment#5yumisims2026-02-11 15:49pairs from chromap results in seg fault
- Issue comment#19yumisims2026-01-22 15:23Version 0.2.2 errors on bam file -- invalid pairs
- Issue comment#19SamCT2026-01-21 23:41Version 0.2.2 errors on bam file -- invalid pairs
- Issue comment#19yumisims2026-01-21 22:55Version 0.2.2 errors on bam file -- invalid pairs
- Issue#19SamCT2026-01-18 15:46Version 0.2.2 errors on bam file -- invalid pairs
- Releaseyumisims2026-01-12 22:08PretextMap-0.2.2
- Issue comment#6yumisims2026-01-09 17:29pairs from pairtools seem to produce a segfault/stack smashing
- Releaseyumisims2026-01-09 17:23PretextMap-v0.2.1
- Issue#10additive32025-12-10 12:19rapid_join.pl
- Issue comment#10additive32025-12-10 12:19rapid_join.pl
- Issue comment#5yumisims2025-12-09 14:09pairs from chromap results in seg fault
- Issue comment#5jacquelinemattos2025-12-08 18:46pairs from chromap results in seg fault
- Issue#15YingChen942025-08-14 21:00Change the texel size when generating the map
- Pull request#13yumisims2025-07-09 20:06
- Issue#12yumisims2025-07-08 21:30pair file as input bug fix
- Issue#12yumisims2025-07-08 21:30pair file as input bug fix
- Issue comment#11Rhia152024-09-06 10:29bam/sam file input
- Issue#11Rhia152024-09-06 10:29bam/sam file input
- Issue comment#11additive32024-09-06 09:24bam/sam file input
- Issue#11Rhia152024-09-05 15:38bam/sam file input
- Issue comment#10Rhia152024-08-14 14:20rapid_join.pl
- Issue comment#10additive32024-08-14 13:39rapid_join.pl
- Issue#10Rhia152024-08-14 10:22rapid_join.pl
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 7 stars here means stars gained during the window, not the repo's star count.