Nextflow pipeline to extract statistics from a genome about its sequence composition
active 2023-08-16 → 2026-05-15 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 1004 days from 2023-08-16 to 2026-05-15. Pushes: 45 total, peak 8 in a day. Pull requests: 20 total, peak 3 in a day. Issues: 19 total, peak 9 in a day. Comments: 34 total, peak 6 in a day. Stars: 0 total, peak 0 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| muffato | 77 | 32 | 7 | 13 |
| tkchafin | 17 | 7 | 9 | 0 |
| github-actions[bot] | 10 | 0 | 0 | 10 |
| Copilot | 8 | 0 | 0 | 5 |
| priyanka-surana | 8 | 0 | 0 | 3 |
| gq1 | 7 | 3 | 2 | 1 |
| sanger-tolsoft | 6 | 3 | 2 | 1 |
| prototaxites | 4 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#49github-actions[bot]2026-04-11 12:08Changes for release
- Pull request#49muffato2026-04-11 12:06
- Pull request#49muffato2026-04-11 12:06
- Issue#45muffato2026-02-19 23:38Centromer finder
- Issue comment#41sanger-tolsoft2025-12-02 10:30Update all modules
- Issue comment#40muffato2025-12-02 10:04Important! Template update for nf-core/tools v3.3.2
- Pull request#38muffato2025-05-18 21:24
- Issue comment#38github-actions[bot]2025-05-18 20:51Important! Template update for nf-core/tools v3.2.1
- Pull request#38sanger-tolsoft2025-05-18 20:45
- Pull request#37muffato2025-05-18 20:42
- Issue comment#37muffato2025-05-07 09:17Important! Template update for nf-core/tools v3.2.0
- Issue comment#37gq12025-05-07 09:11Important! Template update for nf-core/tools v3.2.0
- Issue comment#37github-actions[bot]2025-05-06 10:24Important! Template update for nf-core/tools v3.2.0
- Pull request#37sanger-tolsoft2025-04-06 13:43
- Issue comment#14muffato2025-03-04 16:45stainedglass self-alignment heatmap
- Issue comment#23muffato2025-03-04 10:36Inverted repeats from `einverted`
- Issue comment#18muffato2025-03-04 10:33LTR retrotransposons from `LTRharvest`
- Issue comment#19muffato2025-03-04 10:29Red
- Issue comment#15muffato2025-03-04 10:26Add Pantera
- Issue comment#4muffato2025-03-04 10:22TRASH (Tandem Repeat Annotation and Structural Hierarchy)
- Pull request#36tkchafin2024-12-16 10:08
- Issue comment#36github-actions[bot]2024-12-16 09:44Update ci.yml
- Pull request#35tkchafin2024-12-12 19:44
- Issue comment#35github-actions[bot]2024-12-12 16:54New DOI
- Pull request#35muffato2024-12-12 16:53
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 0 stars here means stars gained during the window, not the repo's star count.