Single-cell epigenomics analysis tools
active 2025-06-30 → 2026-07-19 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 385 days from 2025-06-30 to 2026-07-19. Pushes: 73 total, peak 7 in a day. Pull requests: 13 total, peak 3 in a day. Issues: 35 total, peak 3 in a day. Comments: 18 total, peak 2 in a day. Stars: 23 total, peak 3 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| kaizhang | 60 | 42 | 2 | 5 |
| github-actions[bot] | 29 | 29 | 0 | 0 |
| scverse-bot | 7 | 0 | 0 | 0 |
| scverse-issue-creator[bot] | 3 | 0 | 0 | 1 |
| Xieeeee | 3 | 0 | 0 | 2 |
| lauradmartens | 3 | 0 | 3 | 0 |
| franvz9 | 2 | 0 | 0 | 1 |
| lupr1 | 2 | 0 | 0 | 0 |
| milescsmith | 2 | 0 | 2 | 0 |
| Zethson | 2 | 1 | 1 | 0 |
| flying-sheep | 2 | 0 | 1 | 0 |
| ilan-gold | 2 | 1 | 1 | 0 |
| agupta229 | 1 | 0 | 0 | 1 |
| akash-pandit | 1 | 0 | 1 | 0 |
| YuZhengM | 1 | 0 | 0 | 1 |
| wurucheng123 | 1 | 0 | 0 | 1 |
| divyanshusrivastava | 1 | 0 | 0 | 1 |
| review-notebook-app[bot] | 1 | 0 | 0 | 1 |
| zhaomeng-zhm | 1 | 0 | 0 | 0 |
| simutin22 | 1 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Issue#478scverse-issue-creator[bot]2026-07-19 02:44Integration Testing CI Test Failure on python 3.14
- Issue comment#478scverse-issue-creator[bot]2026-07-19 02:44Integration Testing CI Test Failure on python 3.14
- Pull request#463LinearParadox2026-05-19 01:44
- Issue#455scverse-issue-creator[bot]2026-05-02 02:49Integration Testing CI Test Failure on python 3.12
- Issue comment#457wurucheng1232026-04-10 12:59Restore subset of AnnDataSet in the latest version.
- Issue#454sisprhu2026-03-18 09:33Does SnapATAC2 work for scRNA-seq data?
- Issue#453junruzhu0301032026-03-15 13:21import_fragments takes too longe time
- Issue#452wkl19902026-03-12 18:21Feature Request/Support: Support for mixed fragment_single and fragment_paired keys in AnnDataSet
- Issue#400kaizhang2026-03-05 05:32New version of cellranger-atac breaks frag size distr calculation.
- Pull request#449akash-pandit2026-02-26 04:10
- Issue comment#449review-notebook-app[bot]2026-02-19 22:28replaced broken links in docs
- Issue comment#400divyanshusrivastava2026-02-11 15:49New version of cellranger-atac breaks frag size distr calculation.
- Issue#445kaizhang2026-01-26 09:34`Unable to create stacked arrays for these keys: fragment_paired` warning
- Issue#447kaizhang2026-01-26 09:32Integration Testing CI Install Failure on python 3.12
- Issue#447scverse-bot2026-01-26 01:56Integration Testing CI Install Failure on python 3.12
- Issue comment#445kaizhang2026-01-24 15:53`Unable to create stacked arrays for these keys: fragment_paired` warning
- Issue comment#445adamklie2026-01-22 16:21`Unable to create stacked arrays for these keys: fragment_paired` warning
- Issue#444flying-sheep2026-01-06 12:03Integration Testing CI Test Failure on python 3.12
- Issue#444scverse-bot2026-01-06 01:40Integration Testing CI Test Failure on python 3.12
- Issue#439kaizhang2025-12-31 01:46Integration Testing CI Test Failure on python 3.12
- Issue#440kaizhang2025-12-31 01:46Integration Testing CI Test Failure on python 3.13
- Pull request#442milescsmith2025-12-24 05:19
- Pull request#442milescsmith2025-12-23 21:36
- Issue comment#441simutin222025-12-19 09:55https://snapatac2.scverse.org/ is down
- Issue comment#441kaizhang2025-12-19 00:10https://snapatac2.scverse.org/ is down
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 23 stars here means stars gained during the window, not the repo's star count.