Scalable genetics toolkit
active 2024-03-29 → 2026-05-04 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 767 days from 2024-03-29 to 2026-05-04. Pushes: 7 total, peak 2 in a day. Pull requests: 12 total, peak 1 in a day. Issues: 16 total, peak 2 in a day. Comments: 30 total, peak 5 in a day. Stars: 33 total, peak 2 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| tomwhite | 16 | 0 | 4 | 8 |
| jeromekelleher | 13 | 0 | 0 | 7 |
| timothymillar | 9 | 0 | 3 | 4 |
| hammer | 7 | 1 | 0 | 4 |
| github-actions[bot] | 5 | 5 | 0 | 0 |
| mergify[bot] | 4 | 1 | 2 | 0 |
| jpfeuffer | 3 | 0 | 0 | 2 |
| keewis | 2 | 0 | 0 | 1 |
| hyanwong | 2 | 0 | 0 | 0 |
| mufernando | 2 | 0 | 0 | 1 |
| rajwanir | 1 | 0 | 0 | 0 |
| alxsimon | 1 | 0 | 0 | 0 |
| tristanpwdennis | 1 | 0 | 0 | 1 |
| cademirch | 1 | 0 | 0 | 1 |
| Billyzhang1229 | 1 | 0 | 1 | 0 |
| milesroberts-123 | 1 | 0 | 1 | 0 |
| CarlKCarlK | 1 | 0 | 0 | 1 |
| sanjaynagi | 1 | 0 | 1 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue#1342hyanwong2026-05-04 07:55Remove chunks hack
- Pull request#1339Billyzhang12292026-03-02 15:17
- Pull request#1341sanjaynagi2026-02-18 21:15
- Issue comment#1339jeromekelleher2026-02-06 14:21Fix CI and other issues
- Issue comment#1339tomwhite2026-02-06 08:57Fix CI and other issues
- Issue#1337tomwhite2025-12-22 15:51Unpin xarray
- Pull request#1335timothymillar2025-09-30 19:57
- Issue comment#1335timothymillar2025-09-28 19:41Fix high memory usage bug with chunked HK relationship #1333
- Issue comment#1335timothymillar2025-09-27 03:03Fix high memory usage bug with chunked HK relationship #1333
- Pull request#1335timothymillar2025-09-26 08:31
- Issue#1334alxsimon2025-09-07 09:56missing submodules in install
- Issue#1333timothymillar2025-09-03 00:27Hi memory usage when calculating chunked Hamilton-Kerr relationship matrix
- Issue comment#1332jeromekelleher2025-09-02 08:33Dead link
- Issue comment#1331jeromekelleher2025-08-07 10:40Remove (c)bgen dependency for unpack_variables?
- Issue comment#1331jpfeuffer2025-08-07 08:47Remove (c)bgen dependency for unpack_variables?
- Issue comment#1331jpfeuffer2025-08-07 08:40Remove (c)bgen dependency for unpack_variables?
- Issue#1331jpfeuffer2025-08-06 16:31Remove (c)bgen dependency for unpack_variables?
- Issue comment#1150hammer2025-07-14 06:04read_plink from cloud storage
- Issue comment#1150CarlKCarlK2025-07-14 01:39read_plink from cloud storage
- Issue comment#1330tomwhite2025-07-01 13:45Add `bcftools`-style filtering
- Pull request#1330tomwhite2025-07-01 09:51
- Issue#1327tomwhite2025-07-01 09:24What definition of diversity is used by diversity function?
- Pull request#1328milesroberts-1232025-06-30 19:31
- Issue comment#1321tomwhite2025-06-23 15:25Don't fail build if statsmodels not installable for tests
- Issue comment#1299tomwhite2025-06-23 13:42Use release bio2zarr in tests
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 33 stars here means stars gained during the window, not the repo's star count.