Partial reimplementation of bcftools for VCF Zarr
active 2024-08-06 → 2026-06-08 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 672 days from 2024-08-06 to 2026-06-08. Pushes: 111 total, peak 4 in a day. Pull requests: 151 total, peak 8 in a day. Issues: 150 total, peak 12 in a day. Comments: 249 total, peak 11 in a day. Stars: 16 total, peak 2 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| jeromekelleher | 382 | 66 | 66 | 116 |
| tomwhite | 233 | 24 | 57 | 77 |
| Will-Tyler | 64 | 0 | 17 | 33 |
| benjeffery | 31 | 6 | 10 | 10 |
| github-merge-queue[bot] | 15 | 15 | 0 | 0 |
| JakeHagen | 7 | 0 | 1 | 6 |
| percyfal | 5 | 0 | 0 | 4 |
| elswob | 4 | 0 | 0 | 2 |
| rajwanir | 1 | 0 | 0 | 0 |
| hyanwong | 1 | 0 | 0 | 1 |
| timothymillar | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Pull request#395jeromekelleher2026-05-17 20:17
- Pull request#392jeromekelleher2026-05-15 20:16
- Issue comment#368jeromekelleher2026-05-12 14:36Add --force-unphased option to BGEN output
- Pull request#362jeromekelleher2026-05-11 21:39
- Issue#360jeromekelleher2026-05-11 21:00Add option to bgen output to remove sample IDs from the BGEN file.
- Issue#349jeromekelleher2026-05-08 10:23`_chunk_plan_from_filter` iterates serially over variant chunks
- Pull request#351jeromekelleher2026-05-08 09:46
- Pull request#328jeromekelleher2026-05-01 11:16
- Pull request#324jeromekelleher2026-04-29 18:03
- Issue comment#318jeromekelleher2026-04-24 15:46Add support for Icechunk on Azure
- Pull request#284jeromekelleher2026-04-16 12:49
- Issue#282jeromekelleher2026-04-16 11:17# Bug: VariantChunkReader crashes on FILTER expressions with multi-chunk data
- Pull request#267tomwhite2026-03-16 12:18
- Pull request#263tomwhite2026-02-19 15:14
- Pull request#262tomwhite2026-02-19 10:26
- Issue#237jeromekelleher2026-02-17 09:09Query not formatting missing float fields correctly
- Pull request#259tomwhite2026-02-10 15:31
- Pull request#258tomwhite2026-02-05 14:23
- Issue comment#256tomwhite2026-02-04 11:57Allow icechunk to be used with `--zarr-backend-storage` option
- Issue#257tomwhite2026-02-04 11:56Document how to use vcztools with icechunk storage
- Issue#250jeromekelleher2026-01-08 09:12Fix CPython interface tests CI
- Issue#250tomwhite2026-01-06 14:38Fix CPython interface tests CI
- Issue#250tomwhite2026-01-06 14:38Fix CPython interface tests CI
- Issue comment#245jeromekelleher2025-12-17 11:04Error message when decompressing .vcz data with vcztools
- Issue comment#245jeromekelleher2025-12-17 10:51Error message when decompressing .vcz data with vcztools
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 16 stars here means stars gained during the window, not the repo's star count.