LexicMap: efficient sequence alignment against millions of prokaryotic genomes
active 2024-09-01 → 2026-08-17 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 716 days from 2024-09-01 to 2026-08-17. Pushes: 216 total, peak 7 in a day. Pull requests: 9 total, peak 2 in a day. Issues: 23 total, peak 2 in a day. Comments: 55 total, peak 7 in a day. Stars: 170 total, peak 26 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| shenwei356 | 272 | 216 | 8 | 40 |
| Dx-wmc | 10 | 0 | 0 | 7 |
| xiekunwhy | 6 | 0 | 0 | 3 |
| wwood | 2 | 0 | 0 | 1 |
| andhamel | 2 | 0 | 0 | 1 |
| fjell-dev | 2 | 0 | 0 | 0 |
| 544728460 | 2 | 0 | 0 | 1 |
| iqbal-lab | 2 | 0 | 0 | 1 |
| igortru | 1 | 0 | 0 | 1 |
| ypchan | 1 | 0 | 0 | 0 |
| Caiyulu-818 | 1 | 0 | 0 | 0 |
| dependabot[bot] | 1 | 0 | 1 | 0 |
| arpit20328 | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#5shenwei3562026-03-22 03:46TODO list
- Issue comment#26wwood2026-03-13 03:41SAM format output?
- Issue comment#27shenwei3562026-03-12 08:31Genome-genome alignment question
- Issue comment#26shenwei3562026-03-12 07:16SAM format output?
- Issue comment#26shenwei3562026-03-12 00:43SAM format output?
- Issue comment#26shenwei3562026-03-07 15:10SAM format output?
- Issue comment#26shenwei3562026-03-07 10:55SAM format output?
- Issue comment#26shenwei3562026-03-06 07:24SAM format output?
- Issue comment#30shenwei3562026-03-06 07:22panic: runtime error: index out of range [2992] with length 2956
- Issue comment#30shenwei3562026-03-04 05:13panic: runtime error: index out of range [2992] with length 2956
- Issue#30ypchan2026-03-04 02:59panic: runtime error: index out of range [2992] with length 2956
- Issue comment#26shenwei3562026-02-10 16:34SAM format output?
- Issue#18shenwei3562026-01-28 11:33Query about special tRNAs
- Issue comment#26shenwei3562026-01-12 10:04SAM format output?
- Issue comment#26shenwei3562026-01-09 09:05SAM format output?
- Issue#26wwood2026-01-09 06:52SAM format output?
- Releaseshenwei3562025-12-19 14:05LexicMap v0.8.1
- Issue comment#25shenwei3562025-12-13 00:41Unequal sequence and quality error
- Issue#23shenwei3562025-10-17 15:34Lexicmap runtime panic
- Issue comment#22shenwei3562025-09-12 08:07Can LexicMap being used for reads mapping to caculate genome or gene abundance？
- Issue#22Caiyulu-8182025-09-12 07:33Can LexicMap being used for reads mapping to caculate genome or gene abundance？
- Issue comment#21shenwei3562025-09-12 01:43Feature Request: Add Protein-to-Genome Search (tblastn-like functionality)
- Pull request#20shenwei3562025-09-10 00:15
- Pull request#20shenwei3562025-09-10 00:15
- Pull request#19shenwei3562025-05-07 09:12
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 170 stars here means stars gained during the window, not the repo's star count.