Visualize and annotate genomic coverage with ggplot2
active 2023-08-16 → 2026-01-11 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 880 days from 2023-08-16 to 2026-01-11. Pushes: 12 total, peak 2 in a day. Pull requests: 20 total, peak 2 in a day. Issues: 63 total, peak 6 in a day. Comments: 141 total, peak 7 in a day. Stars: 144 total, peak 9 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| m-jahn | 136 | 5 | 13 | 90 |
| showteeth | 40 | 7 | 6 | 18 |
| ijhoskins | 6 | 0 | 0 | 2 |
| pedrodelosreyes | 4 | 0 | 0 | 3 |
| harrymatthews50 | 4 | 0 | 0 | 4 |
| bvaldebenitom | 4 | 0 | 0 | 2 |
| xiucz | 4 | 0 | 0 | 4 |
| XinWang19 | 3 | 0 | 0 | 0 |
| adeffur | 3 | 0 | 0 | 2 |
| lasi-g | 3 | 0 | 0 | 2 |
| pcantalupo | 3 | 0 | 0 | 2 |
| ileump | 3 | 0 | 0 | 2 |
| olivroy | 2 | 0 | 1 | 1 |
| GuidoLeoni | 2 | 0 | 0 | 1 |
| ofircohn | 2 | 0 | 0 | 1 |
| sebel76 | 2 | 0 | 0 | 1 |
| camillaln | 2 | 0 | 0 | 1 |
| AdrianoWeber | 1 | 0 | 0 | 0 |
| ayooluwaB | 1 | 0 | 0 | 0 |
| priscilla-glenn | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#58m-jahn2025-09-23 10:09Added a small function 'GetGeneGroupPadded' to avoid overlapping gene labels.
- Issue#56lmolokin2025-04-29 16:39Does facet.key="Group" produce an average of coverage across groups?
- Issue#55AdrianoWeber2025-03-31 13:30geom_gene() displays incorrect annotations for subregions
- Issue comment#54bvaldebenitom2025-03-24 16:19Is it possible to highlight specific genes in geom_gene?
- Issue comment#54m-jahn2025-03-18 08:57Is it possible to highlight specific genes in geom_gene?
- Issue comment#52danhtruong2025-02-27 18:11Error in fix.by(by.x, x) : 'by' must specify a uniquely valid column
- Issue#53m-jahn2025-02-19 07:10error when adding annotations
- Issue comment#53camillaln2025-02-18 21:03error when adding annotations
- Issue comment#50m-jahn2025-02-18 15:56Error in stop_if_wrong_length("'seqnames'", ans_len) : 'seqnames' must have the length of the object to construct (1) or length 1
- Issue comment#53m-jahn2025-02-18 15:43error when adding annotations
- Issue comment#53m-jahn2025-02-18 15:41error when adding annotations
- Issue comment#52m-jahn2025-02-18 12:19Error in fix.by(by.x, x) : 'by' must specify a uniquely valid column
- Issue comment#52pcantalupo2025-02-18 11:58Error in fix.by(by.x, x) : 'by' must specify a uniquely valid column
- Issue comment#52m-jahn2025-02-18 07:55Error in fix.by(by.x, x) : 'by' must specify a uniquely valid column
- Issue#53camillaln2025-02-08 16:02error when adding annotations
- Issue comment#51m-jahn2025-02-03 13:41plot showing broken peak, not continuous
- Issue#51wangxu19902025-01-31 20:34plot showing broken peak, not continuous
- Issue comment#46m-jahn2025-01-31 16:25Using binning causes annotations to fail
- Issue comment#50m-jahn2025-01-31 16:13Error in stop_if_wrong_length("'seqnames'", ans_len) : 'seqnames' must have the length of the object to construct (1) or length 1
- Issue comment#50m-jahn2025-01-31 14:01Error in stop_if_wrong_length("'seqnames'", ans_len) : 'seqnames' must have the length of the object to construct (1) or length 1
- Issue#50sopenaml2025-01-29 16:20Error in stop_if_wrong_length("'seqnames'", ans_len) : 'seqnames' must have the length of the object to construct (1) or length 1
- Issue comment#29m-jahn2025-01-28 12:03CRAN Release 1.4.0
- Pull request#45showteeth2025-01-24 07:23
- Issue comment#46m-jahn2025-01-23 14:29Using binning causes annotations to fail
- Issue comment#46m-jahn2025-01-23 13:20Using binning causes annotations to fail
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 144 stars here means stars gained during the window, not the repo's star count.