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snakemake-workflows/dna-seq-benchmark

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A snakemake workflow for benchmarking variant calling approaches with Genome in a Bottle (GIAB), CHM (syndip) or other custom datasets

active 2023-09-242026-08-13 (UTC)

Complete coverage26,648 / 26,648 hourly files (100%) · 2 absent upstream2023-08-152026-08-29 (UTC)
Events
1.1K
Pushes
459
Pull requests
142
Issues
16
Stars
5
Forks
2

Activity over time

Daily event counts in the loaded window

Line chart, 1055 days from 2023-09-24 to 2026-08-13. Pushes: 459 total, peak 15 in a day. Pull requests: 142 total, peak 7 in a day. Issues: 16 total, peak 2 in a day. Comments: 171 total, peak 14 in a day. Stars: 5 total, peak 1 in a day.

  • Pushes
  • Pull requests
  • Issues
  • Comments
  • Stars

Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.

Top contributors

Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity

ContributorContributionsPushesPRsComments
famosab3542343840
johanneskoester183855214
coderabbitai[bot]1740093
BiancaStoecker14890259
github-actions[bot]85502114
dependabot[bot]6060
kubranarci1001

Recent activity

Latest issues, pull requests and releases

  • Pull request#172dependabot[bot]2026-05-02 02:49
  • Pull request#169dependabot[bot]2026-04-13 09:54
  • Pull request#164johanneskoester2026-03-11 11:07
  • Issue#166famosab2026-03-06 10:13
    Save disk space and mark files as temp or protected
  • Pull request#165famosab2026-03-02 12:38
  • Pull request#164johanneskoester2026-03-01 00:47
  • Issue comment#163coderabbitai[bot]2026-02-06 10:42
    perf: autobump conda envs
  • Pull request#162github-actions[bot]2026-02-06 10:36
  • Pull request#160johanneskoester2026-01-30 14:19
  • Pull request#157famosab2026-01-26 14:04
  • Issue comment#156coderabbitai[bot]2026-01-01 23:17
    chore(deps): bump the github-actions group with 2 updates
  • Pull request#156dependabot[bot]2026-01-01 23:17
  • Pull request#156dependabot[bot]2026-01-01 23:17
  • Pull request#154BiancaStoecker2025-12-19 13:10
  • Pull request#153BiancaStoecker2025-12-16 13:13
  • Pull request#153BiancaStoecker2025-12-16 11:31
  • Pull request#152dependabot[bot]2025-12-02 02:20
  • Pull request#149BiancaStoecker2025-11-10 08:26
  • Issue comment#147coderabbitai[bot]2025-10-20 11:52
    perf: bump snakemake wrappers to v7.8.1
  • Issue comment#146coderabbitai[bot]2025-10-06 12:24
    chore(main): release 1.14.1
  • Pull request#146github-actions[bot]2025-10-06 12:23
  • Pull request#145BiancaStoecker2025-10-06 12:23
  • Issue comment#145coderabbitai[bot]2025-10-02 11:53
    perf: bump snakemake wrappers to v7.6.0
  • Pull request#145famosab2025-10-02 11:53
  • Releasegithub-actions[bot]2025-10-02 09:34
    v1.14.0

Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 5 stars here means stars gained during the window, not the repo's star count.