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spatts14/Xenium_5k_analysis_pipeline

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Analysis pipeline for spatial transcriptomics

active 2025-10-072026-03-16 (UTC)

Complete coverage26,665 / 26,665 hourly files (100%) · 2 absent upstream2023-08-152026-08-30 (UTC)
Events
487
Pushes
315
Pull requests
29
Issues
7
Stars
0
Forks
0

Activity over time

Daily event counts in the loaded window

Line chart, 161 days from 2025-10-07 to 2026-03-16. Pushes: 315 total, peak 28 in a day. Pull requests: 29 total, peak 4 in a day. Issues: 7 total, peak 2 in a day. Comments: 58 total, peak 8 in a day. Stars: 0 total, peak 0 in a day.

  • Pushes
  • Pull requests
  • Issues
  • Comments
  • Stars

Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.

Top contributors

Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity

ContributorContributionsPushesPRsComments
spatts14351312264
Copilot730354
pre-commit-ci[bot]3300

Recent activity

Latest issues, pull requests and releases

  • Pull request#89spatts142026-03-16 12:04
  • Pull request#81spatts142026-02-11 21:25
  • Pull request#81spatts142026-02-11 21:25
  • Pull request#80spatts142026-02-07 14:29
  • Pull request#79spatts142026-01-28 19:41
  • Pull request#76spatts142025-12-14 10:29
  • Pull request#75spatts142025-12-14 10:04
  • Pull request#73spatts142025-12-05 08:35
  • Pull request#71spatts142025-12-03 14:43
  • Pull request#69spatts142025-11-27 14:04
  • Pull request#67spatts142025-11-23 18:41
  • Pull request#66spatts142025-11-23 00:18
  • Pull request#61spatts142025-11-20 20:56
  • Pull request#59spatts142025-11-17 17:52
  • Pull request#57Copilot2025-11-07 09:13
  • Pull request#57Copilot2025-11-07 09:13
  • Issue comment#55Copilot2025-11-07 09:13
    HLCA full processing for integration
  • Pull request#56Copilot2025-11-07 09:13
  • Issue#53spatts142025-11-04 11:42
    Merge back to ReCoDe
  • Issue#52spatts142025-11-02 12:29
    Use config set for one module for additional downstream
  • Pull request#50spatts142025-10-29 12:14
  • Pull request#41spatts142025-10-22 13:13
  • Pull request#39spatts142025-10-20 11:38
  • Issue#12spatts142025-10-18 11:05
    Setting random seed
  • Issue comment#3spatts142025-10-18 11:03
    Import all ROIs/samples

Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 0 stars here means stars gained during the window, not the repo's star count.