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MetaWorks is a flexible multi-marker metabarcode pipeline for processing paired-end Illumina reads from raw fastq.gz files to taxonomic assignments.

active 2023-08-172026-02-22 (UTC)

Complete coverage26,676 / 26,676 hourly files (100%) · 2 absent upstream2023-08-152026-08-30 (UTC)
Events
66
Pushes
2
Pull requests
0
Issues
14
Stars
3
Forks
1

Activity over time

Daily event counts in the loaded window

Line chart, 921 days from 2023-08-17 to 2026-02-22. Pushes: 2 total, peak 2 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 14 total, peak 3 in a day. Comments: 44 total, peak 5 in a day. Stars: 3 total, peak 1 in a day.

  • Pushes
  • Pull requests
  • Issues
  • Comments
  • Stars

Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.

Top contributors

Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity

ContributorContributionsPushesPRsComments
terrimporter292021
ejlaqua10006
camrynbigelow8007
pedroaslongo5004
NailouZhang3001
Jess-Schultz3003
gjdury2002

Recent activity

Latest issues, pull requests and releases

  • Issue comment#15terrimporter2024-06-28 21:58
    Error in rule subset_taxonomy_by_taxon1
  • Issue comment#15camrynbigelow2024-06-28 15:28
    Error in rule subset_taxonomy_by_taxon1
  • Issue comment#15terrimporter2024-06-26 02:47
    Error in rule subset_taxonomy_by_taxon1
  • Issue comment#15camrynbigelow2024-06-25 20:12
    Error in rule subset_taxonomy_by_taxon1
  • Issue comment#15terrimporter2024-06-25 15:56
    Error in rule subset_taxonomy_by_taxon1
  • Issue comment#15camrynbigelow2024-06-25 15:02
    Error in rule subset_taxonomy_by_taxon1
  • Issue comment#15camrynbigelow2024-06-24 13:06
    Error in rule subset_taxonomy_by_taxon1
  • Issue comment#15terrimporter2024-06-21 21:56
    Error in rule subset_taxonomy_by_taxon1
  • Issue comment#15camrynbigelow2024-06-21 21:03
    Error in rule subset_taxonomy_by_taxon1
  • Issue comment#15terrimporter2024-06-21 19:36
    Error in rule subset_taxonomy_by_taxon1
  • Issue comment#15camrynbigelow2024-06-21 13:58
    Error in rule subset_taxonomy_by_taxon1
  • Issue comment#15camrynbigelow2024-06-21 13:50
    Error in rule subset_taxonomy_by_taxon1
  • Issue comment#15terrimporter2024-06-20 23:44
    Error in rule subset_taxonomy_by_taxon1
  • Issue#15camrynbigelow2024-06-20 21:42
    Error in rule subset_taxonomy_by_taxon1
  • Issue#14ejlaqua2024-04-17 21:59
    Problem with column "SampleName" in results.csv
  • Issue comment#14ejlaqua2024-04-17 21:59
    Problem with column "SampleName" in results.csv
  • Issue comment#14terrimporter2024-04-13 20:49
    Problem with column "SampleName" in results.csv
  • Issue#14ejlaqua2024-04-10 18:59
    Problem with column "SampleName" in results.csv
  • Issue#13terrimporter2023-10-19 21:56
    Can MetaWorks accommodate merged Illumina reads?
  • Issue#9terrimporter2023-10-19 21:56
    Issues in MetaWorks 12.0 Tutorial
  • Issue comment#13Jess-Schultz2023-10-01 21:31
    Can MetaWorks accommodate merged Illumina reads?
  • Issue comment#13terrimporter2023-10-01 18:26
    Can MetaWorks accommodate merged Illumina reads?
  • Issue comment#13Jess-Schultz2023-10-01 17:55
    Can MetaWorks accommodate merged Illumina reads?
  • Issue comment#13Jess-Schultz2023-09-29 12:56
    Can MetaWorks accommodate merged Illumina reads?
  • Issue comment#13terrimporter2023-09-29 01:47
    Can MetaWorks accommodate merged Illumina reads?

Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 3 stars here means stars gained during the window, not the repo's star count.