The DifCover pipeline aims to identify regions in a reference genome for which the read coverage of a sample1 to the reference is significantly different from the read coverage of a sample2
active 2024-04-24 → 2026-03-20 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 696 days from 2024-04-24 to 2026-03-20. Pushes: 0 total, peak 0 in a day. Pull requests: 1 total, peak 1 in a day. Issues: 3 total, peak 1 in a day. Comments: 7 total, peak 2 in a day. Stars: 2 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| pguarnizob | 4 | 0 | 0 | 2 |
| timnat | 3 | 0 | 0 | 3 |
| nikostr | 3 | 0 | 1 | 1 |
| danielyao12 | 1 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Issue#5pguarnizob2026-03-20 03:35Can't open union.bed file }g~�sample1_sample2.unionbedcv
- Issue comment#5pguarnizob2026-03-20 03:35Can't open union.bed file }g~�sample1_sample2.unionbedcv
- Issue comment#5pguarnizob2026-03-08 21:10Can't open union.bed file }g~�sample1_sample2.unionbedcv
- Issue comment#5timnat2026-03-06 15:06Can't open union.bed file }g~�sample1_sample2.unionbedcv
- Issue#5pguarnizob2026-03-06 01:18Can't open union.bed file }g~�sample1_sample2.unionbedcv
- Issue comment#3nikostr2025-01-09 11:16Adding DifCover to bioconda
- Issue comment#3timnat2024-12-17 15:37Adding DifCover to bioconda
- Issue comment#3danielyao122024-12-17 06:31Adding DifCover to bioconda
- Pull request#4nikostr2024-05-31 19:58
- Issue comment#3timnat2024-05-28 00:23Adding DifCover to bioconda
- Issue#3nikostr2024-05-27 08:05Adding DifCover to bioconda
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 2 stars here means stars gained during the window, not the repo's star count.