Convert various sequence formats to FASTA
active 2023-09-18 → 2026-03-21 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 916 days from 2023-09-18 to 2026-03-21. Pushes: 21 total, peak 6 in a day. Pull requests: 5 total, peak 2 in a day. Issues: 28 total, peak 11 in a day. Comments: 12 total, peak 4 in a day. Stars: 38 total, peak 3 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| tseemann | 57 | 19 | 1 | 11 |
| Copilot | 5 | 2 | 3 | 0 |
| telatin | 2 | 0 | 1 | 0 |
| safrye | 1 | 0 | 0 | 0 |
| erikrikarddaniel | 1 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Issue#39tseemann2026-01-10 22:29Ordered Hash class?
- Issue#40tseemann2026-01-10 22:28Handle FASTA "comments"
- Issue#40tseemann2026-01-10 22:28Handle FASTA "comments"
- Issue#39telatin2025-12-31 07:49Ordered Hash class?
- Issue#37tseemann2025-12-30 04:47Protein mode
- Releasetseemann2025-12-30 01:48Next time I'll try to be FASTA
- Issue comment#35tseemann2025-12-30 00:35Stripping sequence 'descriptions'
- Issue#37tseemann2025-12-29 23:25Protein mode
- Issue#37tseemann2025-12-29 23:25Protein mode
- Issue#37tseemann2025-12-29 23:25Protein mode
- Issue#15tseemann2025-12-29 23:16Add option to deal with pipe chars in IDs
- Issue#15tseemann2025-12-29 23:16Add option to deal with pipe chars in IDs
- Issue#36tseemann2025-12-29 23:15Don't read whole file into memory first
- Issue#35tseemann2025-12-29 23:14Stripping sequence 'descriptions'
- Issue#35tseemann2025-12-29 23:14Stripping sequence 'descriptions'
- Issue#35tseemann2025-12-29 23:14Stripping sequence 'descriptions'
- Issue#14tseemann2025-12-29 23:11NCBI gbff file to fasta
- Issue comment#14tseemann2025-12-29 23:11NCBI gbff file to fasta
- Issue comment#19tseemann2025-12-29 23:08N sequence for GBK missing // terminator
- Issue comment#17tseemann2025-12-29 23:07Robuster GBK parsing
- Issue#24tseemann2025-12-29 23:06GBK should use VERSION not ACCESSION for sequence ID
- Issue comment#31tseemann2025-12-29 22:24CI: Unable to flush stdout: Broken pipe
- Issue comment#27tseemann2025-12-27 02:59"ERROR: Unfamilar format with first line" with gzipped file
- Issue#16tseemann2025-12-27 02:57Add BED output option
- Issue#34tseemann2025-12-27 02:56Trouble handling very large .fq.gz files
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 38 stars here means stars gained during the window, not the repo's star count.