Analyzing gene expression and gene/ncRNA coexpression in three species of stony coral. This work builds on completed summary of the ncRNA landscape of these species (deep-dive).
active 2024-09-25 → 2026-07-09 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 653 days from 2024-09-25 to 2026-07-09. Pushes: 318 total, peak 21 in a day. Pull requests: 2 total, peak 2 in a day. Issues: 93 total, peak 12 in a day. Comments: 142 total, peak 11 in a day. Stars: 2 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
Recent activity
Latest issues, pull requests and releases
- Issue comment#49zbengt2025-11-21 19:51confirm lncRNA numbers, fasta, and bed for all 3 species
- Issue comment#49sr3202025-10-24 15:28confirm lncRNA numbers, fasta, and bed for all 3 species
- Pull request#60sr3202025-10-06 03:58
- Pull request#60Copilot2025-10-06 03:37
- Issue#58sr3202025-08-01 16:16Remove CT SNPs from methylation data
- Issue comment#49zbengt2025-08-01 02:34confirm lncRNA numbers, fasta, and bed for all 3 species
- Issue comment#57zbengt2025-08-01 02:28Details on lncRNA discovery pipeline -- all 0 counts
- Issue comment#57shedurkin2025-07-30 20:55Details on lncRNA discovery pipeline -- all 0 counts
- Issue comment#57shedurkin2025-07-30 14:24Details on lncRNA discovery pipeline -- all 0 counts
- Issue comment#57zbengt2025-07-30 00:23Details on lncRNA discovery pipeline -- all 0 counts
- Issue comment#57shedurkin2025-07-29 21:18Details on lncRNA discovery pipeline -- all 0 counts
- Issue comment#57shedurkin2025-07-29 20:41Details on lncRNA discovery pipeline -- all 0 counts
- Issue comment#57shedurkin2025-07-29 20:39Details on lncRNA discovery pipeline -- all 0 counts
- Issue#49zdellaert2025-07-29 08:33confirm lncRNA numbers, fasta, and bed for all 3 species
- Issue comment#49zbengt2025-07-28 19:16confirm lncRNA numbers, fasta, and bed for all 3 species
- Issue comment#49zdellaert2025-07-24 19:46confirm lncRNA numbers, fasta, and bed for all 3 species
- Issue comment#49zbengt2025-07-24 19:42confirm lncRNA numbers, fasta, and bed for all 3 species
- Issue comment#50kubu42025-07-09 15:54GOslim summary figure for 3 species gene expression
- Issue comment#57zbengt2025-06-25 20:51Details on lncRNA discovery pipeline -- all 0 counts
- Issue#57shedurkin2025-06-25 00:10Details on lncRNA discovery pipeline -- all 0 counts
- Issue comment#51shedurkin2025-06-25 00:05Pull `mature_miRNA` features from full gffs
- Issue#51shedurkin2025-06-25 00:05Pull `mature_miRNA` features from full gffs
- Issue comment#49zbengt2025-06-24 07:10confirm lncRNA numbers, fasta, and bed for all 3 species
- Issue comment#53sr3202025-06-23 18:12lncRNA count matrices contain duplicates
- Issue#54sr3202025-06-23 18:12lncRNA count matrix does not contain all lncRNA
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 2 stars here means stars gained during the window, not the repo's star count.