Harmonized annotation of microbial physiology
active 2023-09-03 → 2026-07-29 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 1061 days from 2023-09-03 to 2026-07-29. Pushes: 84 total, peak 6 in a day. Pull requests: 5 total, peak 2 in a day. Issues: 10 total, peak 5 in a day. Comments: 21 total, peak 5 in a day. Stars: 1 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| sdgamboa | 76 | 51 | 4 | 13 |
| github-actions[bot] | 27 | 27 | 0 | 0 |
| jwokaty | 9 | 2 | 1 | 6 |
| lwaldron | 3 | 1 | 0 | 1 |
| delaney-collins | 2 | 2 | 0 | 0 |
| LiNk-NY | 1 | 1 | 0 | 0 |
| rlesiyon | 1 | 0 | 0 | 1 |
| shbrief | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue#253sdgamboa2024-08-21 19:40Get number of coding genes and genome size from the NCBI
- Issue comment#251rlesiyon2024-07-17 04:16Can't open/find BacDive associated spreadsheet
- Issue comment#251sdgamboa2024-07-16 01:55Can't open/find BacDive associated spreadsheet
- Pull request#250sdgamboa2024-06-27 21:34
- Issue comment#250sdgamboa2024-06-27 21:33Changes requested for inclusion in Bioconductor
- Pull request#250sdgamboa2024-06-27 21:32
- Issue comment#241sdgamboa2024-06-21 20:54Add scores to signatures created with makeSignatures
- Issue#241sdgamboa2024-06-21 20:54Add scores to signatures created with makeSignatures
- Issue#248sdgamboa2024-06-21 20:51Clarify use of lima::voom for GSEA
- Issue#247sdgamboa2024-06-21 20:49Fix plant pathogenicity directly in the curation file
- Issue#246sdgamboa2024-06-21 20:45Lack of input parameter checking.
- Issue comment#244sdgamboa2024-06-21 20:01Inconsistent use of camelCase and snake_case
- Issue#244sdgamboa2024-06-21 20:01Inconsistent use of camelCase and snake_case
- Issue#242sdgamboa2024-06-19 20:34Adding (or not) fatty acid compositions for bugphyzz signatures
- Issue comment#240sdgamboa2024-04-03 00:07WIP Set up import from Zenodo, GitHub hash; remove .downloadZ
- Issue comment#240jwokaty2024-04-03 00:01WIP Set up import from Zenodo, GitHub hash; remove .downloadZ
- Issue comment#240jwokaty2024-04-02 01:38WIP Set up import from Zenodo, GitHub hash; remove .downloadZ
- Issue comment#240sdgamboa2024-03-29 21:53WIP Set up import from Zenodo, GitHub hash; remove .downloadZ
- Issue comment#240jwokaty2024-03-29 21:29WIP Set up import from Zenodo, GitHub hash; remove .downloadZ
- Issue comment#240sdgamboa2024-03-29 21:24WIP Set up import from Zenodo, GitHub hash; remove .downloadZ
- Issue comment#240sdgamboa2024-03-29 21:16WIP Set up import from Zenodo, GitHub hash; remove .downloadZ
- Issue comment#240jwokaty2024-03-29 20:34WIP Set up import from Zenodo, GitHub hash; remove .downloadZ
- Pull request#240jwokaty2024-03-29 13:27
- Issue#239sdgamboa2024-03-22 20:16Large File Sharing not included in release.
- Issue comment#235sdgamboa2024-01-22 03:49`importBugphyzz` returns a list?
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 1 stars here means stars gained during the window, not the repo's star count.