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Repository with code for the analysis of pathogenic STRs in the 1000G ONT resequencing data

active 2024-07-022026-08-03 (UTC)

Partial coverage15,169 / 18,592 hourly files (82%) · 2 absent upstream · 3,422 failed, retryable2024-06-282026-08-11 (UTC)— sampled evenly across the window, so rankings and trends hold; absolute counts scale up.
Events
23
Pushes
13
Pull requests
2
Issues
2
Stars
1
Forks
0

Activity over time

Daily event counts in the loaded window

Line chart, 763 days from 2024-07-02 to 2026-08-03. Pushes: 13 total, peak 1 in a day. Pull requests: 2 total, peak 2 in a day. Issues: 2 total, peak 1 in a day. Comments: 3 total, peak 2 in a day. Stars: 1 total, peak 1 in a day.

  • Pushes
  • Pull requests
  • Issues
  • Comments
  • Stars

Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.

Top contributors

Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity

ContributorContributionsPushesPRsComments
wdecoster141202
Copilot4121
tzhu-bio1000
omermurik1000

Recent activity

Latest issues, pull requests and releases

  • Issue comment#9wdecoster2025-11-28 08:50
    aSTRonaut add flanking sequence.
  • Issue comment#10Copilot2025-11-28 08:37
    Add PDF and image format output support to aSTRonaut script
  • Pull request#10Copilot2025-11-28 08:16
  • Pull request#10Copilot2025-11-28 08:16
  • Issue#9tzhu-bio2025-11-13 07:58
    aSTRonaut add flanking sequence.
  • Issue comment#8wdecoster2024-08-27 06:55
    hg19-based VCF upload
  • Issue#8omermurik2024-08-27 06:17
    hg19-based VCF upload

Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 1 stars here means stars gained during the window, not the repo's star count.