A Python-based module for creating flexible and robust spike sorting pipelines.
active 2025-01-28 → 2026-07-17 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 536 days from 2025-01-28 to 2026-07-17. Pushes: 219 total, peak 8 in a day. Pull requests: 313 total, peak 9 in a day. Issues: 203 total, peak 10 in a day. Comments: 1,321 total, peak 43 in a day. Stars: 92 total, peak 4 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| alejoe91 | 682 | 136 | 103 | 240 |
| zm711 | 453 | 1 | 19 | 270 |
| samuelgarcia | 357 | 31 | 35 | 166 |
| chrishalcrow | 344 | 25 | 42 | 158 |
| h-mayorquin | 191 | 4 | 20 | 106 |
| yger | 92 | 5 | 34 | 29 |
| ecobost | 42 | 0 | 15 | 19 |
| JoeZiminski | 32 | 6 | 2 | 14 |
| dervinism | 14 | 0 | 0 | 14 |
| grahamfindlay | 12 | 0 | 1 | 8 |
| Copilot | 12 | 0 | 2 | 4 |
| Julie-Fabre | 10 | 0 | 2 | 5 |
| tayheau | 10 | 0 | 2 | 5 |
| DavidLucha | 9 | 0 | 0 | 8 |
| pauladkisson | 8 | 2 | 1 | 2 |
| b-grimaud | 8 | 0 | 0 | 5 |
| pre-commit-ci[bot] | 8 | 7 | 1 | 0 |
| oliche | 8 | 0 | 0 | 7 |
| JeffreyBoucher | 8 | 0 | 0 | 7 |
| jakeswann1 | 7 | 0 | 3 | 4 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#4675alejoe912026-07-14 08:22Fix `test_pipeline_equiv_to_step`
- Issue comment#4465alejoe912026-06-29 16:43Use `ProbeGroup` object instead of `contact_vector` property
- Issue comment#4588h-mayorquin2026-06-13 00:31Move `generate_ground_truth_recording` to generation module
- Pull request#4592cwindolf2026-05-29 03:05
- Issue comment#4502grahamfindlay2026-05-21 01:47Implement `get_unit_spike_trains` and performance improvements
- Issue comment#4579grahamfindlay2026-05-21 01:14Implement cache spike vector for phy sorting reader
- Issue comment#4589chrishalcrow2026-05-20 10:10KS4 test matrix is failing on Kilosort 4.1.1 – 4.1.6 (NumPy 2.0 incompatibility)
- Issue#4590h-mayorquin2026-05-20 07:25Clarify scope of `valid_unit_periods` extension and the `periods` argument in metric extensions
- Pull request#4585h-mayorquin2026-05-19 04:59
- Pull request#4581alejoe912026-05-14 10:47
- Issue comment#4580alejoe912026-05-14 10:38`unit_locations` fails with 3D probe
- Issue comment#4564galenlynch2026-05-10 22:52`n_workers` kwarg for FilterRecording and CommonReferenceRecording
- Issue#4576saikoukunt2026-05-07 20:29correlograms with swapped indices are not mirrored versions of each other
- Issue comment#4573h-mayorquin2026-05-06 20:29Fix module level test groups
- Issue comment#4539alejoe912026-05-06 10:24Extend artifact detection: `DetectAndRemoveArtifacts` preprocessor and signed saturation
- Pull request#4574chrishalcrow2026-05-04 09:38
- Pull request#4574chrishalcrow2026-05-04 09:38
- Pull request#4573chrishalcrow2026-05-04 08:17
- Pull request#4573chrishalcrow2026-05-04 08:17
- Issue#4569MGAMZ2026-04-29 23:57Empty string filename in `params.py` causes `phylib` crash when kilosort `use_binary_file` param is not True
- Pull request#4564galenlynch2026-04-24 01:07
- Pull request#4552h-mayorquin2026-04-21 23:33
- Pull request#4551h-mayorquin2026-04-21 23:18
- Pull request#4548h-mayorquin2026-04-21 20:49
- Issue comment#4366chrishalcrow2026-04-20 15:25Kilosort output for sorting analyzer
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 92 stars here means stars gained during the window, not the repo's star count.